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  5. Sam_g45060

Sam_g45060


Description : not classified & original description: none


Gene families : OG0007939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45060
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Sam_g02434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10004 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g19715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
CC GO:0005890 sodium:potassium-exchanging ATPase complex IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
CC GO:0090533 cation-transporting ATPase complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000533 Tropomyosin 44 275
No external refs found!