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  5. Sam_g44072

Sam_g44072


Description : not classified & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g44072

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00014560 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aspi01Gene72654.t1 Aspi01Gene72654 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72655.t1 OBE1, Aspi01Gene72655 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ceric.18G008400.1 OBE2, Ceric.18G008400 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27694 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04752 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
MA_82295g0010 No alias no description available(sp|q10pc5|tta1_orysj : 95.1) 0.02 OrthoFinder output from all 47 species
Ppi_g03975 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013014 OBE1 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sam_g36358 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Smo158800 OBE2 OBERON-like protein OS=Nicotiana benthamiana 0.02 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g11564 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!