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  5. Sam_g42369

Sam_g42369


Description : CAPE precursor polypeptide & original description: none


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g42369
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Aob_g32347 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g03730.1 LOC_Os07g03730 Pathogenesis-related protein PRMS OS=Zea mays... 0.01 OrthoFinder output from all 47 species
Sam_g32347 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41353 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0042981 regulation of apoptotic process IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR003582 ShKT_dom 301 342
IPR014044 CAP_domain 76 213
No external refs found!