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  5. Sam_g41631

Sam_g41631


Description : component *(eS19) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000873_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g41631
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00069670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
AT3G02080 No alias Ribosomal protein S19e family protein 0.02 OrthoFinder output from all 47 species
Adi_g048362 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Als_g07025 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os03g31090.1 LOC_Os03g31090 component RPS19 of SSU proteome 0.01 OrthoFinder output from all 47 species
Lfl_g31872 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_10427917g0010 No alias component RPS19 of SSU proteome 0.01 OrthoFinder output from all 47 species
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.01 OrthoFinder output from all 47 species
Msp_g37856 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Pp3c14_19640V3.1 Pp3c14_19640 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Ppi_g59938 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Solyc12g039120.2.1 Solyc12g039120 component RPS19 of SSU proteome 0.01 OrthoFinder output from all 47 species
Spa_g02912 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 15 115
No external refs found!