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  5. Sam_g40539

Sam_g40539


Description : not classified & original description: none


Gene families : OG0002186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40539

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00128980 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g03407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010635 No alias not classified & original description: CDS=25-1191 0.03 OrthoFinder output from all 47 species
Ceric.02G026100.1 Ceric.02G026100 not classified & original description: pacid=50585185... 0.06 OrthoFinder output from all 47 species
Ehy_g12944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033899001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_31732 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37610.1 LOC_Os08g37610 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g24365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431582g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435533g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_116156g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g10823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g010280.3.1 Solyc09g010280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g15177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003387_P005 Zm00001e003387 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!