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  5. Sam_g40466

Sam_g40466


Description : not classified & original description: none


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40466

Target Alias Description ECC score Gene Family Method Actions
Aop_g26316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22904.t1 Aspi01Gene22904 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25358.t1 Aspi01Gene25358 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26241.t1 Aspi01Gene26241 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37768.t1 CRK8, Aspi01Gene37768 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72033.t1 CRK8, Aspi01Gene72033 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G019600.1 Ceric.02G019600 not classified & original description: pacid=50584278... 0.04 OrthoFinder output from all 47 species
Dac_g35653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_14290V3.1 Pp3c5_14290 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g46923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g015225.1.1 Solyc09g015225 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Spa_g20554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 8 93
No external refs found!