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  5. Sam_g39893

Sam_g39893


Description : not classified & original description: none


Gene families : OG0002979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39893

Target Alias Description ECC score Gene Family Method Actions
AT3G10050 OMR1 L-O-methylthreonine resistant 1 0.03 OrthoFinder output from all 47 species
Cba_g58441 OMR1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G002500.1 OMR1, Ceric.11G002500 EC_4.3 carbon-nitrogen lyase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.57 OMR1 Amino acid metabolism.degradation.threonine.threonine dehydratase 0.02 OrthoFinder output from all 47 species
Mp4g17110.1 OMR1 threonine deaminase. threonine dehydratase 0.02 OrthoFinder output from all 47 species
Pnu_g13574 OMR1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07163 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001721 TD_ACT-like 55 143
No external refs found!