Sam_g39885


Description : not classified & original description: none


Gene families : OG0009408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009408_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39885

Target Alias Description ECC score Gene Family Method Actions
Sam_g01110 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g05200 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g13986 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g24673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25006 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g25128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35615 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g35888 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g36657 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g38912 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g44908 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g48350 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g49587 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!