1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g39515

Sam_g39515


Description : not classified & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39515

Target Alias Description ECC score Gene Family Method Actions
AT1G05500 SYT5, NTMC2T2.1,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Aob_g07245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15096.t1 NTMC2TYPE4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G020800.1 SYT5, NTMC2T2.1,... not classified & original description: pacid=50567395... 0.03 OrthoFinder output from all 47 species
Cre01.g044600 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g044650 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g08577 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025699001 NTMC2T1.3, SYT3,... Synaptotagmin-3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp6g02520.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g02059 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Msp_g32127 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012198 SYT5, NTMC2T2.1,... not classified & original description: CDS=63-1322 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020642 SYT5, NTMC2T2.1,... not classified & original description: CDS=317-1894 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 443 542
IPR000008 C2_dom 262 366
IPR039010 Synaptotagmin_SMP 71 248
No external refs found!