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  5. Sam_g39231

Sam_g39231


Description : proton:monovalent cation antiporter *(CHX) & original description: none


Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39231
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00181590 CHX15, ATCHX15,... Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
AT4G23700 CHX17, ATCHX17 cation/H+ exchanger 17 0.02 OrthoFinder output from all 47 species
Adi_g103229 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0477.g073046 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.53 CHX17, ATCHX17 Cation/H(+) antiporter 17 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01026473001 CHX15, ATCHX15 Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
LOC_Os02g58660.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Ore_g15435 ATCHX20, CHX20 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Ore_g38565 ATCHX20, CHX20 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Pp3c16_9320V3.1 ATCHX18, CHX18,... cation/H+ exchanger 18 0.02 OrthoFinder output from all 47 species
Ppi_g18837 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026504 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26568 No alias proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g032240.4.1 ATCHX2, CHX2,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Solyc06g009240.4.1 CHX15, ATCHX15,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Solyc08g008190.4.1 ATCHX18, CHX18,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Solyc08g081820.4.1 ATCHX18, CHX18,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Spa_g06524 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015611_P004 ATCHX1, CHX1,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Zm00001e026782_P001 ATCHX19, CHX19,... proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 44 433
No external refs found!