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  5. Sam_g39172

Sam_g39172


Description : delta-12/delta-15 fatty acid desaturase & original description: none


Gene families : OG0001987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39172

Target Alias Description ECC score Gene Family Method Actions
Lfl_g07016 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Mp5g20700.1 FAD7, FADD omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Msp_g19334 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Nbi_g21175 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ore_g38317 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 67 140
IPR005804 FA_desaturase_dom 148 401
No external refs found!