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  5. Sam_g39163

Sam_g39163


Description : mannan synthesis accessory protein *(MSR) & original description: none


Gene families : OG0003025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39163

Target Alias Description ECC score Gene Family Method Actions
AT3G21190 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Aob_g03269 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04728 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06682 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Aop_g30274 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G058400.1 Ceric.06G058400 mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Dac_g12170 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Dac_g15452 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g20020 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016156001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
Nbi_g43787 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01040 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g33079 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 106 377
No external refs found!