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  5. Sam_g39107

Sam_g39107


Description : component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex & original description: none


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39107

Target Alias Description ECC score Gene Family Method Actions
Adi_g055082 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014144 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ceric.10G051600.1 ATG18C,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Dde_g04333 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Mp1g16930.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005508 ATG18C, ATATG18C component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022497 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 330 360
No external refs found!