1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g29215

Lfl_g29215 (AGL42)


Aliases : AGL42

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00081270 PI,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AMTR_s00140p00045380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT3G57390 AGL18 AGAMOUS-like 18 0.03 OrthoFinder output from all 47 species
AT4G11880 AGL14 AGAMOUS-like 14 0.03 OrthoFinder output from all 47 species
Ala_g05911 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19952 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21427 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012250001 AGL7, AP1 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01018450001 AGL6 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
LOC_Os06g11330.1 SVP, AGL22,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os06g23980.1 AGL16, LOC_Os06g23980 MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ppi_g02675 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33045 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013783 STK, AGL11 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g35224 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030373_P001 AGL10, CAL1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 224 308
IPR002100 TF_MADSbox 148 195
No external refs found!