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  5. Sam_g38297

Sam_g38297


Description : not classified & original description: none


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38297
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Ala_g25235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015235 No alias not classified & original description: CDS=201-1475 0.04 OrthoFinder output from all 47 species
Cba_g32128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007796001 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
GSVIVT01009438001 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Msp_g05986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002893 No alias not classified & original description: CDS=719-2329 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010698 No alias not classified & original description: CDS=200-1438 0.02 OrthoFinder output from all 47 species
Spa_g11635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 12 93
No external refs found!