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  5. Sam_g38280

Sam_g38280


Description : not classified & original description: none


Gene families : OG0002436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38280
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Ala_g29595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g34617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z026400.1 Ceric.1Z026400 not classified & original description: pacid=50632644... 0.03 OrthoFinder output from all 47 species
Ceric.38G014000.1 Ceric.38G014000 not classified & original description: pacid=50579540... 0.04 OrthoFinder output from all 47 species
Ceric.38G014100.1 Ceric.38G014100 not classified & original description: pacid=50580648... 0.04 OrthoFinder output from all 47 species
Dde_g14913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16757 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g18545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34076 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!