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  5. Sam_g38223

Sam_g38223


Description : not classified & original description: none


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00203330 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Adi_g002873 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Adi_g063475 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Als_g06933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G045500.1 Ceric.03G045500 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Gb_24687 No alias Formin-like protein 18 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7783491g0010 AFH14 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Mp4g12830.1 AFH14 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Ore_g16788 AFH14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40646 AFH14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26531 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Smo74599 AFH14 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Solyc12g010110.3.1 Solyc12g010110 Formin-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022144_P001 Zm00001e022144 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Zm00001e036313_P001 Zm00001e036313 Formin-like protein 6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR014020 Tensin_C2-dom 199 336
No external refs found!