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  5. Sam_g38153

Sam_g38153


Description : not classified & original description: none


Gene families : OG0001176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38153

Target Alias Description ECC score Gene Family Method Actions
Len_g10513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g18801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g43755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g44226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48352 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g49184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 14 94
No external refs found!