1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g37831

Sam_g37831


Description : not classified & original description: none


Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37831

Target Alias Description ECC score Gene Family Method Actions
Adi_g107378 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26360 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10348.t1 UPL1, Aspi01Gene10348 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21858 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014698001 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_26784 UPL2 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g19139 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32036 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06511 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR010309 E3_Ub_ligase_DUF908 207 363
IPR010309 E3_Ub_ligase_DUF908 88 167
IPR010314 E3_Ub_ligase_DUF913 425 762
No external refs found!