Sam_g37824


Description : component *(FES1) of FRI-C transcription effector complex & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37824

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00110320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Adi_g051625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32464 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037825 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Gb_19122 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os03g11580.1 LOC_Os03g11580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g21498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19528 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Solyc06g069440.3.1 Solyc06g069440 Zinc finger CCCH domain-containing protein 38... 0.02 OrthoFinder output from all 47 species
Zm00001e000843_P002 Zm00001e000843 Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 134 154
No external refs found!