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  5. Sam_g37509

Sam_g37509


Description : not classified & original description: none


Gene families : OG0001508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37509

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00213010 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT4G15830 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g33184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G045600.1 Ceric.33G045600 not classified & original description: pacid=50606932... 0.05 OrthoFinder output from all 47 species
Ehy_g00995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017734001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_18598 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22435 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g70560.1 LOC_Os01g70560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g00468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028379_P001 Zm00001e028379 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032334_P001 Zm00001e032334 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030991 intraciliary transport particle A IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 138 302
No external refs found!