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  5. Sam_g37176

Sam_g37176


Description : not classified & original description: none


Gene families : OG0001792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37176

Target Alias Description ECC score Gene Family Method Actions
Adi_g005029 No alias proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62923.t1 PA200, Aspi01Gene62923 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Dcu_g04998 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Ore_g17276 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Solyc07g066030.4.1 PA200, Solyc07g066030 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901031 regulation of response to reactive oxygen species IEP HCCA
BP GO:1902882 regulation of response to oxidative stress IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021843 PSME4_C 673 760
No external refs found!