Sam_g36809

Description : not classified & original description: none

Gene families : OG0002108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g36809

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00168430	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.05	OrthoFinder output from all 47 species
AT3G08530	No alias	Clathrin, heavy chain	0.02	OrthoFinder output from all 47 species
Als_g14456	No alias	heavy chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Cre02.g101400	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
GSVIVT01032792001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	OrthoFinder output from all 47 species
Gb_33029	No alias	Clathrin heavy chain 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Len_g11569	No alias	heavy chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009296_P003	Zm00001e009296	heavy chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species
Zm00001e020822_P001	Zm00001e020822	heavy chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species
Zm00001e023940_P002	Zm00001e023940	heavy chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015348	Clathrin_H-chain_linker_core	344	367
IPR022365	Clathrin_H-chain_propeller_rpt	22	55
IPR022365	Clathrin_H-chain_propeller_rpt	155	197

External Links

No external refs found!