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  5. Sam_g36096

Sam_g36096


Description : component *(EAF1) of NuA4 histone acetyltransferase complex & original description: none


Gene families : OG0001880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36096
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.07 OrthoFinder output from all 47 species
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.1 OrthoFinder output from all 47 species
Adi_g047752 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Adi_g107358 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Adi_g112779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20989 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Aop_g08156 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009719 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Azfi_s0384.g067472 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Cba_g32209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z107100.1 Ceric.1Z107100 component *(EAF1) of NuA4 histone acetyltransferase... 0.08 OrthoFinder output from all 47 species
Dac_g06715 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Dcu_g44993 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.14 OrthoFinder output from all 47 species
Ehy_g16159 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
GSVIVT01028685001 No alias Chromatin modification-related protein EAF1 A... 0.11 OrthoFinder output from all 47 species
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.07 OrthoFinder output from all 47 species
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.1 OrthoFinder output from all 47 species
LOC_Os05g51550.1 LOC_Os05g51550 Chromatin modification-related protein EAF1 B... 0.05 OrthoFinder output from all 47 species
LOC_Os08g08000.1 LOC_Os08g08000 component EAF1 of NuA4 histone acetyltransferase complex 0.07 OrthoFinder output from all 47 species
Len_g14156 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.07 OrthoFinder output from all 47 species
MA_118641g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_16444g0030 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.08 OrthoFinder output from all 47 species
Msp_g36976 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Nbi_g05491 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Ore_g18801 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Pir_g12255 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Pnu_g07031 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Pp3c26_13463V3.1 Pp3c26_13463 Helicase/SANT-associated, DNA binding protein 0.02 OrthoFinder output from all 47 species
Pp3c4_31630V3.1 Pp3c4_31630 Helicase/SANT-associated, DNA binding protein 0.02 OrthoFinder output from all 47 species
Ppi_g42118 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021615 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.02 OrthoFinder output from all 47 species
Solyc06g083420.3.1 Solyc06g083420 component EAF1 of NuA4 histone acetyltransferase complex 0.06 OrthoFinder output from all 47 species
Solyc09g060080.4.1 Solyc09g060080 component EAF1 of NuA4 histone acetyltransferase complex 0.07 OrthoFinder output from all 47 species
Spa_g15643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42104 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Tin_g13754 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Zm00001e020520_P002 Zm00001e020520 component EAF1 of NuA4 histone acetyltransferase complex 0.1 OrthoFinder output from all 47 species
Zm00001e020521_P001 Zm00001e020521 component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species
Zm00001e026671_P001 Zm00001e026671 component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014012 HSA_dom 549 603
No external refs found!