Sam_g36084

Description : not classified & original description: none

Gene families : OG0003485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g36084

Target	Alias	Description	ECC score	Gene Family Method
Adi_g086873	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g086874	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g096899	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117127	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g33358	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g63206	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06329	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03533	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25696	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g00258	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12907	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g14462	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g57352	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	HCCA
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027934	CES_Znf_RING	96	173
IPR005150	Cellulose_synth	453	618

External Links

No external refs found!

Sam_g36084

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation