Sam_g35868


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35868

Target Alias Description ECC score Gene Family Method Actions
Aev_g09482 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34479 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g45361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10315.t1 Aspi01Gene10315 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23414.t1 Aspi01Gene23414 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28781.t1 Aspi01Gene28781 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33064.t1 Aspi01Gene33064 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48853.t1 ORF107E, Aspi01Gene48853 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54906.t1 Aspi01Gene54906 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre09.g398141 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g46136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19118 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10706 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 OrthoFinder output from all 47 species
Len_g02042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37318 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_23310V3.1 Pp3c4_23310 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g59422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10924 ORF107E not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 329 387
IPR041373 RT_RNaseH 163 238
IPR000477 RT_dom 1 82
No external refs found!