Sam_g35242

Description : histone chaperone *(NAP) & original description: none

Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g35242

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00247340	NFA03, NFA3,...	Chromatin organisation.histone chaperone...	0.04	OrthoFinder output from all 47 species
Adi_g078522	NFA02, NFA2, NAP1;2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g102779	NFA02, NFA2, NAP1;2	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13852	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0018.g014775	ATNAP1;1, NAP1;1	histone chaperone *(NAP) & original description: CDS=127-1098	0.05	OrthoFinder output from all 47 species
Ceric.23G058600.1	NFA03, NFA3,...	histone chaperone *(NAP) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.32G047400.1	NFA02, NFA2,...	histone chaperone *(NAP) & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001310.8	NFA03, NFA3, NAP1;3	Chromatin organisation.histone chaperone...	0.02	OrthoFinder output from all 47 species
Cre09.g416350	NFA02, NFA2, NAP1;2	Chromatin organisation.histone chaperone...	0.02	OrthoFinder output from all 47 species
Dac_g11381	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.04	OrthoFinder output from all 47 species
Mp6g17990.1	NFA02, NFA2, NAP1;2	histone chaperone (NAP)	0.02	OrthoFinder output from all 47 species
Pir_g11239	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g23530	NFA02, NFA2, NAP1;2	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15776	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g16940	No alias	histone chaperone *(NAP) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g56275	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e027693_P004	NFA02, NFA2,...	histone chaperone (NAP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002164	NAP_family	55	299

External Links

No external refs found!

Sam_g35242

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation