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  5. Lfl_g28843

Lfl_g28843


Description : not classified & original description: none


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28843

Target Alias Description ECC score Gene Family Method Actions
Adi_g089077 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.03 OrthoFinder output from all 47 species
Adi_g102778 PFU2, UBC23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13680 UBC24, PHO2, ATUBC24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72571 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.03 OrthoFinder output from all 47 species
Dac_g08948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g14300.1 UBC25, PFU1,... Probable ubiquitin-conjugating enzyme E2 25... 0.03 OrthoFinder output from all 47 species
Mp4g14440.1 UBC25, PFU1 Probable ubiquitin-conjugating enzyme E2 25... 0.02 OrthoFinder output from all 47 species
Msp_g16178 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22176 UBC25, PFU1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08457 No alias E2 ubiquitin-conjugating protein *(PHO2) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 1094 1226
No external refs found!