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  5. Sam_g34704

Sam_g34704


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g34704

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 HRE2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00099690 RAP2.6,... Ethylene-responsive transcription factor ERF110... 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G28360 ATERF12, ERF12 ERF domain protein 12 0.02 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.03 OrthoFinder output from all 47 species
AT1G49120 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.04 OrthoFinder output from all 47 species
AT4G34410 RRTF1 redox responsive transcription factor 1 0.04 OrthoFinder output from all 47 species
Adi_g006781 PUCHI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008628 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Adi_g056295 ERF110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103195 ATERF12, ERF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09217 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09461 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g12610 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g42330 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10058 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10652 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g36562 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g37615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51788 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01030 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g01801 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g13161 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25998 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aop_g10500 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21624 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g26411 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38397 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39294 tny not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene07513.t1 Aspi01Gene07513 subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07603.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene08499.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17041.t1 Aspi01Gene17041 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21110.t1 DEAR2, Aspi01Gene21110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23166.t1 DREB26, Aspi01Gene23166 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24329.t1 Aspi01Gene24329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24408.t1 DEAR2, Aspi01Gene24408 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26705.t1 TINY2, Aspi01Gene26705 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32071.t1 Aspi01Gene32071 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34450.t1 Aspi01Gene34450 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47254.t1 TINY2, Aspi01Gene47254 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48121.t1 Aspi01Gene48121 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49723.t1 HRE2, Aspi01Gene49723 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53872.t1 DEAR1, CEJ1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59644.t1 Rap2.6L, Aspi01Gene59644 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72130.t1 TINY2, Aspi01Gene72130 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014119 ATERF8, ATERF-8, ERF8 not classified & original description: CDS=1-357 0.03 OrthoFinder output from all 47 species
Cba_g69639 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G083900.1 RAP2.2, Ceric.01G083900 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ceric.02G053400.1 ERF7, ATERF7,... not classified & original description: pacid=50585332... 0.03 OrthoFinder output from all 47 species
Ceric.02G053500.1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G001200.1 Ceric.07G001200 not classified & original description: pacid=50626761... 0.03 OrthoFinder output from all 47 species
Ceric.19G006100.1 HRE2, Ceric.19G006100 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cre16.g649433 RAP2.2 No description available 0.02 OrthoFinder output from all 47 species
Dac_g28422 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08691 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Dcu_g15881 PUCHI subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g17120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25479 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g31465 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g52058 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07535 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g25048 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30923 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01021146001 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g57340.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31580.1 RAP2.4, LOC_Os08g31580 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g09985 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39445 HRE1 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46834 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g00983 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g34118 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38154 Rap2.6L not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g03917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05472 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g12537 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26000 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Nbi_g00480 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04002 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g09103 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Nbi_g09626 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g18009 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g21637 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38462 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g10934 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g13982 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g33732 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06333 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12819 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g31283 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g05046 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g08500 ERF110 subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09795 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g11929 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15852 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ppi_g17524 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014770 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023147 No alias not classified & original description: CDS=1-1539 0.02 OrthoFinder output from all 47 species
Sam_g21922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g077370.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc12g038440.1.1 HRE2, Solyc12g038440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15143 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g32809 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25197 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e006692_P001 Zm00001e006692 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e007205_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1E... 0.02 OrthoFinder output from all 47 species
Zm00001e007352_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e009867_P001 RAP2.12, Zm00001e009867 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e015430_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e028920_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 264 313
No external refs found!