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  5. Sam_g34691

Sam_g34691


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g34691

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00148320 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00212280 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00217880 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00230640 evm_27.TU.AmTr_v1... Alpha-L-fucosidase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00230810 evm_27.TU.AmTr_v1... GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G09390 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G28640 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G31550 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26430 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G14450 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g000676 FXG1, ATFXG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01672.t1 Aspi01Gene01672 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42835.t1 Aspi01Gene42835 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42914.t1 Aspi01Gene42914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67531.t1 Aspi01Gene67531 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014885 No alias not classified & original description: CDS=1-324 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048708 No alias not classified & original description: CDS=1-681 0.04 OrthoFinder output from all 47 species
Cba_g07122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g61472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G087000.1 Ceric.10G087000 not classified & original description: pacid=50612007... 0.03 OrthoFinder output from all 47 species
Ceric.29G054000.1 Ceric.29G054000 not classified & original description: pacid=50625525... 0.02 OrthoFinder output from all 47 species
Ceric.30G052800.1 FXG1, ATFXG1,... not classified & original description: pacid=50608510... 0.02 OrthoFinder output from all 47 species
Ceric.35G066200.1 Ceric.35G066200 not classified & original description: pacid=50582009... 0.03 OrthoFinder output from all 47 species
Dac_g36140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03504 FXG1, ATFXG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000005001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01000006001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11650.1 LOC_Os01g11650 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g22640.1 LOC_Os01g22640 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46120.1 LOC_Os01g46120 GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46220.1 LOC_Os01g46220 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g39155.1 LOC_Os02g39155 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g39590.1 LOC_Os02g39590 GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g62740.1 LOC_Os03g62740 GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06710.1 LOC_Os05g06710 GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06720.2 LOC_Os05g06720 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g43110.1 LOC_Os05g43110 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g06250.2 LOC_Os06g06250 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g25400.1 LOC_Os10g25400 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g07418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09837 GLIP6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44297 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17030 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10390582g0010 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8677409g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g13460.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g19690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23205 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22101 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c2_2900V3.1 Pp3c2_2900 GDSL-like Lipase/Acylhydrolase superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g03705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63479 FXG1, ATFXG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099040.4.1 Solyc01g099040 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 OrthoFinder output from all 47 species
Solyc03g006250.2.1 Solyc03g006250 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g006487.1.1 Solyc08g006487 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 OrthoFinder output from all 47 species
Spa_g10034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012850_P001 Zm00001e012850 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014225_P001 Zm00001e014225 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024860_P001 Zm00001e024860 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036439_P002 Zm00001e036439 GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 89 415
No external refs found!