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  5. Sam_g34243

Sam_g34243


Description : not classified & original description: none


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g34243
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Ceric.01G015900.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z063000.1 ACAM-6, CAM6,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.65 ACAM-6, CAM6 Calmodulin-2 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Sam_g29201 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Smo413463 ACAM-6, CAM6 Calmodulin OS=Triticum aestivum 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 31
IPR002048 EF_hand_dom 48 105
No external refs found!