Sam_g32153

Description : component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex & original description: none

Gene families : OG0001535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001535_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g32153
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AT1G57720	No alias	Translation elongation factor EF1B, gamma chain	0.04	OrthoFinder output from all 47 species
Adi_g017751	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Adi_g112175	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Aev_g32138	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Ala_g01717	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Als_g22806	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Aop_g11146	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Aspi01Gene23877.t1	Aspi01Gene23877	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Ceric.09G069500.1	Ceric.09G069500	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.08	OrthoFinder output from all 47 species
Ceric.12G009500.1	Ceric.12G009500	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Dac_g06348	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.05	OrthoFinder output from all 47 species
Dde_g06033	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
LOC_Os02g12794.3	LOC_Os02g12794	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
LOC_Os06g37440.1	LOC_Os06g37440	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.16	OrthoFinder output from all 47 species
Len_g17738	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Mp7g04100.1	No alias	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.15	OrthoFinder output from all 47 species
Msp_g08318	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.1	OrthoFinder output from all 47 species
Msp_g34531	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Nbi_g06136	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.06	OrthoFinder output from all 47 species
Nbi_g34434	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g40134	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g39523	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Ore_g43931	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Pir_g05852	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Pir_g19670	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g33941	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Ppi_g18257	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Sam_g07305	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Sam_g13004	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Sam_g33826	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Sam_g46603	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.11	OrthoFinder output from all 47 species
Sam_g50575	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g08037	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.1	OrthoFinder output from all 47 species
Tin_g02785	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.1	OrthoFinder output from all 47 species
Zm00001e014465_P001	Zm00001e014465	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.06	OrthoFinder output from all 47 species
Zm00001e024937_P001	Zm00001e024937	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
Zm00001e030647_P003	Zm00001e030647	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.05	OrthoFinder output from all 47 species
Zm00001e037277_P002	Zm00001e037277	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008073	ornithine decarboxylase inhibitor activity	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
MF	GO:0042979	ornithine decarboxylase regulator activity	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004046	GST_C	113	197
IPR001662	EF1B_G_C	280	385
IPR004045	Glutathione_S-Trfase_N	4	77

External Links

No external refs found!

Sam_g32153

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation