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  5. Sam_g31817

Sam_g31817


Description : not classified & original description: none


Gene families : OG0008404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g31817
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Aop_g50143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g36125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g01307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g44178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g44357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005861 troponin complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001765 membrane raft assembly IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031109 microtubule polymerization or depolymerization IEP HCCA
BP GO:0031579 membrane raft organization IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044854 plasma membrane raft assembly IEP HCCA
BP GO:0044857 plasma membrane raft organization IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046785 microtubule polymerization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0070836 caveola assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071709 membrane assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001978 Troponin 20 148
No external refs found!