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  5. Lfl_g28508

Lfl_g28508


Description : E4 polyubiquitination factor *(UAP) & original description: none


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28508
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT4G28300 No alias Protein of unknown function (DUF1421) 0.03 OrthoFinder output from all 47 species
Als_g11536 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59735.t1 Aspi01Gene59735 E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26828 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00949 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08951 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 568 612
No external refs found!