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  5. Sam_g30186

Sam_g30186


Description : HUA2-type transcription factor & original description: none


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30186
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 HUA2,... RNA biosynthesis.transcriptional activation.HUA2... 0.07 OrthoFinder output from all 47 species
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.12 OrthoFinder output from all 47 species
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g019417 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11061 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12546 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g15874 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g22454 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g42142 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17265 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20186 HUA2 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene06214.t1 HUA2, Aspi01Gene06214 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42433.t1 Aspi01Gene42433 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009802 HUA2 HUA2-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024616 HUA2 HUA2-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Azfi_s0048.g030472 HUA2 HUA2-type transcription factor & original description: CDS=1-4200 0.04 OrthoFinder output from all 47 species
Azfi_s0119.g046734 HUA2 HUA2-type transcription factor & original description: CDS=1-4872 0.05 OrthoFinder output from all 47 species
Cba_g72521 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G048700.1 HUA2, Ceric.33G048700 HUA2-type transcription factor & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.36G034600.1 HUA2, Ceric.36G034600 HUA2-type transcription factor & original description:... 0.09 OrthoFinder output from all 47 species
Dcu_g08999 No alias HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14860 HUA2 HUA2-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g05043 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10037 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21799 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25712 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011100001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.1 OrthoFinder output from all 47 species
GSVIVT01012049001 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.06 OrthoFinder output from all 47 species
Gb_39860 HUA2 transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species
LOC_Os03g24339.1 LOC_Os03g24339 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
LOC_Os07g46180.1 LOC_Os07g46180 transcription factor (HUA2) 0.05 OrthoFinder output from all 47 species
LOC_Os08g01054.2 HUA2, LOC_Os08g01054 transcription factor (HUA2) 0.11 OrthoFinder output from all 47 species
Len_g21971 HUA2 HUA2-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Len_g53945 HUA2 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Len_g54062 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04290 HUA2 HUA2-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
MA_3338g0010 No alias transcription factor (HUA2) 0.04 OrthoFinder output from all 47 species
MA_6999g0010 No alias Protein HUA2-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9328225g0010 HUA2 Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9359526g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp8g15320.1 HUA2 transcription factor (HUA2) 0.07 OrthoFinder output from all 47 species
Msp_g27240 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08516 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12711 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36625 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16391 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g13849 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13358 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011426 HUA2 HUA2-type transcription factor & original description: CDS=5-4222 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013240 HUA2 HUA2-type transcription factor & original description: CDS=1-3765 0.03 OrthoFinder output from all 47 species
Smo404055 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.06 OrthoFinder output from all 47 species
Smo414202 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.04 OrthoFinder output from all 47 species
Solyc02g014115.1.1 HUA2, Solyc02g014115 transcription factor (HUA2) 0.02 OrthoFinder output from all 47 species
Solyc02g014130.3.1 HUA2, Solyc02g014130 ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc09g064840.4.1 Solyc09g064840 transcription factor (HUA2) 0.11 OrthoFinder output from all 47 species
Spa_g08440 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10511 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11569 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001720_P002 Zm00001e001720 transcription factor (HUA2) 0.08 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.07 OrthoFinder output from all 47 species
Zm00001e029104_P001 HUA2, Zm00001e029104 transcription factor (HUA2) 0.09 OrthoFinder output from all 47 species
Zm00001e038169_P004 Zm00001e038169 transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 24 106
IPR006569 CID_dom 833 956
No external refs found!