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  5. Sam_g30148

Sam_g30148


Description : EC_1.3 oxidoreductase acting on CH-CH group of donor & original description: none


Gene families : OG0003596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30148

Target Alias Description ECC score Gene Family Method Actions
Aev_g12388 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01018976001 SDH1-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.02 OrthoFinder output from all 47 species
Gb_15563 SDH1-1 flavoprotein component SDH1 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
Spa_g09084 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR003953 FAD-binding_2 46 442
No external refs found!