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  5. Sam_g30138

Sam_g30138


Description : not classified & original description: none


Gene families : OG0002106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30138
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
MA_10427217g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429385g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g22270.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g27054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025414 No alias not classified & original description: CDS=1-3054 0.03 OrthoFinder output from all 47 species
Spa_g15324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!