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Description : component *(ILP1) of Intron-Lariat Spliceosome complex & original description: none
Gene families : OG0005427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005427_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00252610 | ILP1,... | Transcriptional repressor ILP1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT5G08550 | ILP1 | GC-rich sequence DNA-binding factor-like protein | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12884 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G009600.1 | ILP1, Ceric.36G009600 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g269350 | ILP1 | Transcriptional repressor ILP1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g34306 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13440 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011956001 | ILP1 | Transcriptional repressor ILP1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g63670.2 | ILP1, LOC_Os03g63670 | component ILP1 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05708 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g18770.1 | ILP1 | component ILP1 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17614 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g010970 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo161477 | ILP1 | Transcriptional repressor ILP1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05338 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07350 | ILP1 | component *(ILP1) of Intron-Lariat Spliceosome complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e006399_P001 | ILP1, Zm00001e006399 | component ILP1 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030289 | protein phosphatase 4 complex | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022783 | GCFC_dom | 669 | 874 |
| No external refs found! |