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  5. Sam_g30105

Sam_g30105


Description : subunit A of V-type ATPase peripheral V1 subcomplex & original description: none


Gene families : OG0003887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30105
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G78900 VHA-A vacuolar ATP synthase subunit A 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010049 VHA-A subunit A of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Ceric.37G042600.1 VHA-A, Ceric.37G042600 subunit A of V-type ATPase peripheral V1 subcomplex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.2 VHA-A Solute transport.primary active transport.V-type ATPase... 0.03 OrthoFinder output from all 47 species
Cre10.g461050 VHA-A Solute transport.primary active transport.V-type ATPase... 0.04 OrthoFinder output from all 47 species
GSVIVT01029546001 VHA-A Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
LOC_Os06g45120.1 VHA-A, LOC_Os06g45120 subunit A of V-type ATPase peripheral V1 subcomplex 0.04 OrthoFinder output from all 47 species
Lfl_g01767 VHA-A subunit A of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Mp2g14700.1 VHA-A subunit A of V-type ATPase peripheral V1 subcomplex 0.02 OrthoFinder output from all 47 species
Mp4g11270.1 VHA-A subunit A of V-type ATPase peripheral V1 subcomplex 0.02 OrthoFinder output from all 47 species
Nbi_g06988 VHA-A subunit A of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Smo167777 VHA-A Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
Solyc12g055800.3.1 VHA-A, Solyc12g055800 subunit A of V-type ATPase peripheral V1 subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e013769_P001 VHA-A, Zm00001e013769 subunit A of V-type ATPase peripheral V1 subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e025122_P003 VHA-A, Zm00001e025122 subunit A of V-type ATPase peripheral V1 subcomplex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 25 85
IPR031686 ATP-synth_a_Xtn 102 223
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 232 458
No external refs found!