Sam_g30079


Description : not classified & original description: none


Gene families : OG0001176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001176_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30079

Target Alias Description ECC score Gene Family Method Actions
Adi_g092077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006639 No alias not classified & original description: CDS=1-333 0.02 OrthoFinder output from all 47 species
Sam_g00899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g01236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g01687 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g02303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03389 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g04740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07200 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g07401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g21209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g31483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g31885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g42345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g43877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g44284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g44593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g49185 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g51709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!