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  5. Sam_g29871

Sam_g29871


Description : component *(MED8) of head module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0006634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29871

Target Alias Description ECC score Gene Family Method Actions
Aob_g15814 MED8 component *(MED8) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Aop_g32924 MED8 component *(MED8) of head module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Dac_g08181 MED8 component *(MED8) of head module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
LOC_Os03g31010.1 MED8, LOC_Os03g31010 component MED8 of head module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Lfl_g06081 MED8 component *(MED8) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ore_g18496 MED8 component *(MED8) of head module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Solyc03g123960.3.1 MED8, Solyc03g123960 component MED8 of head module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e034880_P001 MED8, Zm00001e034880 component MED8 of head module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!