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  5. Sam_g29847

Sam_g29847


Description : not classified & original description: none


Gene families : OG0002355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29847

Target Alias Description ECC score Gene Family Method Actions
Adi_g018471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16032.t1 Aspi01Gene16032 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.74 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g08386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_2209381g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_26499g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g17958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!