Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex & original description: none
Gene families : OG0003554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003554_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g29824 | |
Cluster | HCCA: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00167530 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
Adi_g013022 | No alias | transcriptional co-activator *(BET/GTE) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g28619 | No alias | SMARCF component *(LFR) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g03435 | No alias | transcriptional co-activator *(BET/GTE) & original... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g04640.1 | No alias | transcriptional co-activator (BET/GTE) | 0.01 | OrthoFinder output from all 47 species | |
Ore_g26143 | No alias | SMARCF component *(LFR) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
MF | GO:0008483 | transaminase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001487 | Bromodomain | 184 | 265 |
No external refs found! |