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  5. Sam_g29804

Sam_g29804


Description : voltage-gated potassium cation channel *(AKT/SKOR/GORK) & original description: none


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29804

Target Alias Description ECC score Gene Family Method Actions
AT2G26650 ATAKT1, AKT1, KT1 K+ transporter 1 0.03 OrthoFinder output from all 47 species
AT4G32650 AtLKT1, KC1, KAT3, ATKC1 potassium channel in Arabidopsis thaliana 3 0.03 OrthoFinder output from all 47 species
Als_g12566 ATAKT1, AKT1, KT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64705.t1 SKOR, Aspi01Gene64705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64708.t1 SKOR, Aspi01Gene64708 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010724 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Cba_g27318 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Ceric.13G024300.1 ATAKT1, AKT1,... voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020902.48 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020902.49 GORK Potassium channel GORK OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g278111 ATAKT1, AKT1, KT1 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g12117 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
GSVIVT01015479001 ATAKT1, AKT1, KT1 Solute transport.channels.VIC superfamily.voltage-gated... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11250.1 KAT1, LOC_Os01g11250 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
MA_10436994g0030 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
Sam_g33570 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Solyc11g011500.2.1 SKOR, Solyc11g011500 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
Tin_g32450 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR021789 KHA_dom 773 840
IPR002110 Ankyrin_rpt 620 669
IPR002110 Ankyrin_rpt 527 609
IPR000595 cNMP-bd_dom 395 477
IPR005821 Ion_trans_dom 57 304
No external refs found!