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  5. Sam_g28817

Sam_g28817


Description : not classified & original description: none


Gene families : OG0001627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28817

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0174.g055915 No alias not classified & original description: CDS=45-635 0.05 OrthoFinder output from all 47 species
Azfi_s0438.g069987 No alias not classified & original description: CDS=139-1152 0.03 OrthoFinder output from all 47 species
Ceric.15G027200.1 Ceric.15G027200 not classified & original description: pacid=50639700... 0.03 OrthoFinder output from all 47 species
Ceric.1Z236600.1 Ceric.1Z236600 not classified & original description: pacid=50597015... 0.02 OrthoFinder output from all 47 species
Ceric.38G053700.1 Ceric.38G053700 not classified & original description: pacid=50579945... 0.02 OrthoFinder output from all 47 species
Gb_03516 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g23049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!