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  5. Sam_g28771

Sam_g28771


Description : synthase component of pyridoxal 5-phosphate synthase complex & original description: none


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28771
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Adi_g117601 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Aev_g24421 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Ala_g13022 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Aob_g05019 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009574 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Cba_g66610 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.05 OrthoFinder output from all 47 species
Ceric.04G042900.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.05 OrthoFinder output from all 47 species
Dac_g09304 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Dde_g52271 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g00885 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
LOC_Os07g01020.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os10g01080.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
Len_g02684 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Lfl_g02826 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Mp2g20880.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
Msp_g04774 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Ore_g31170 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Pir_g12484 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Ppi_g14809 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 85 289
No external refs found!