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  5. Sam_g28597

Sam_g28597


Description : not classified & original description: none


Gene families : OG0002225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28597
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Aev_g18542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g48640.1 LOC_Os02g48640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g31360.1 LOC_Os09g31360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g13771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018043 No alias not classified & original description: CDS=121-1659 0.02 OrthoFinder output from all 47 species
Sam_g38318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g056620.3.1 Solyc11g056620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA

No InterPro domains available for this sequence

No external refs found!