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  5. Sam_g28504

Sam_g28504


Description : tRNA dihydrouridine synthase & original description: none


Gene families : OG0004183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28504

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02556p00000250 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Ala_g02241 No alias tRNA dihydrouridine synthase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15270 No alias tRNA dihydrouridine synthase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13151 No alias tRNA dihydrouridine synthase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024158001 No alias RNA processing.RNA modification.dihydrouridylation.tRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os04g02730.1 LOC_Os04g02730 tRNA dihydrouridine synthase 0.03 OrthoFinder output from all 47 species
MA_10435966g0030 No alias tRNA dihydrouridine synthase 0.02 OrthoFinder output from all 47 species
Nbi_g13279 No alias tRNA dihydrouridine synthase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29220 No alias tRNA dihydrouridine synthase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR035587 DUS-like_FMN-bd 375 627
No external refs found!