Sam_g28488


Description : not classified & original description: none


Gene families : OG0000686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000686_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28488

Target Alias Description ECC score Gene Family Method Actions
Adi_g005238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50204.t1 Aspi01Gene50204 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0057.g034355 No alias not classified & original description: CDS=1-816 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053552 No alias not classified & original description: CDS=542-1090 0.03 OrthoFinder output from all 47 species
Cba_g05700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G043200.1 Ceric.01G043200 not classified & original description: pacid=50591508... 0.02 OrthoFinder output from all 47 species
Ceric.15G028600.1 Ceric.15G028600 not classified & original description: pacid=50639726... 0.02 OrthoFinder output from all 47 species
Ceric.15G046900.1 Ceric.15G046900 not classified & original description: pacid=50640274... 0.03 OrthoFinder output from all 47 species
Ceric.20G092600.1 Ceric.20G092600 not classified & original description: pacid=50566798... 0.07 OrthoFinder output from all 47 species
Ceric.24G005300.1 Ceric.24G005300 not classified & original description: pacid=50628647... 0.04 OrthoFinder output from all 47 species
Ceric.24G005400.1 Ceric.24G005400 not classified & original description: pacid=50629941... 0.02 OrthoFinder output from all 47 species
Ceric.39G007600.1 Ceric.39G007600 not classified & original description: pacid=50583196... 0.03 OrthoFinder output from all 47 species
Dac_g04048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000393 No alias not classified & original description: CDS=1-618 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014298 No alias not classified & original description: CDS=1-633 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019487 No alias not classified & original description: CDS=286-816 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0976.g027888 No alias not classified & original description: CDS=1-375 0.02 OrthoFinder output from all 47 species
Sam_g11815 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g14321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g18557 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g23644 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g03581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!