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  5. Sam_g28396

Sam_g28396


Description : not classified & original description: none


Gene families : OG0004539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28396

Target Alias Description ECC score Gene Family Method Actions
AT5G65840 No alias Thioredoxin superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.13G051600.1 Ceric.13G051600 not classified & original description: pacid=50635538... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.94 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01007444001 No alias Thioredoxin-like protein AAED1, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os03g51960.1 LOC_Os03g51960 no description available(sp|q9zuu2|pxl2c_arath : 85.9) 0.02 OrthoFinder output from all 47 species
Msp_g00430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012107_P001 Zm00001e012107 no description available(sp|q9zuu2|pxl2c_arath : 88.6) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR032801 PXL2A/B/C 183 300
No external refs found!